rs118187422 chr19:1021520 T>C
- Sequence
ataggtgtgacagtaacccttgag[T/C]cgtgctcgcttcggcagcacatat
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- MBL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MBL2_HUMAN | -0.20 | 1.26 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Breast_Mammary_Tissue, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid