rs12032511 chr1:225767929 C>G
- Sequence
cccccgccccaggaagttaggaag[C/G]tttttaaaggccttgtttgtgctt
- ASB in cell types
- HepG2 (hepatoblastoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN TEAD1_HUMAN P66A_HUMAN RXRB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.98 | 0.24 | 1.80 | n/a | No Hit | |||
| TEAD1_HUMAN | 3.01 | -3.10 | 1.00 | 2.66 | Discordant | |||
| P66A_HUMAN | 2.79 | -2.86 | 1.00 | n/a | n/a | |||
| RXRB_HUMAN | 2.63 | n/a | 1.50 | n/a | No Hit | |||
| SKI_HUMAN | 2.38 | n/a | 1.00 | n/a | n/a |
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Motif analysis
