rs12037934 chr1:28746946 A>G
- Sequence
aaaatacaaaattagctgggcgtg[A/G]tggtgcatgcctgtaatcccagct
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- GLIS1_HUMAN OSR2_HUMAN ZN770_HUMAN ZBT17_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GLIS1_HUMAN | 3.16 | n/a | 2.00 | n/a | No Hit | |||
| OSR2_HUMAN | 2.22 | n/a | 2.00 | n/a | No Hit | |||
| ZN770_HUMAN | 1.63 | n/a | 2.00 | n/a | No Hit | |||
| ZBT17_HUMAN | 2.45 | n/a | 2.00 | n/a | No Hit | |||
| PATZ1_HUMAN | 2.71 | -1.91 | 2.00 | 1.92 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial, Thyroid, Whole_Blood