rs12042111 chr1:26378326 T>A
- Sequence
agccccacttcctccctgaaaacc[T/A]taaaaacttcttcaacccatatcc
- ASB in cell types
- TTC-1240 (Rhabdoid tumor of the kidney) K562 (myelogenous leukemia) macrophages form periferal blood MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN MECOM_HUMAN SMRC1_HUMAN FLI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.09 | 0.61 | 1.23 | n/a | No Hit | |||
| MECOM_HUMAN | -0.63 | 1.40 | 1.25 | n/a | n/a | |||
| SMRC1_HUMAN | 0.12 | 1.51 | 1.25 | n/a | n/a | |||
| FLI1_HUMAN | 0.72 | 1.71 | 1.00 | n/a | No Hit | |||
| CDK9_HUMAN | -0.21 | 1.22 | 1.00 | n/a | n/a |
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