rs12045693 chr1:2274142 C>A
- Sequence
ggattgaggaaggtagcgctttgt[C/A]aatggcactggttttgctccgagg
- ASB for transcription factors
- PAX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PAX2_HUMAN | 1.84 | -0.89 | 2.00 | -2.61 | Concordant |
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Motif analysis
Genetic associations
GRASP aortic valve calcium, height, ldl cholesterol, parkinsons disease, serum creatinine, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Whole_Blood