rs12068175 chr1:153783715 G>C
- Sequence
gcggaaaggcgtcaggcgcatgga[G/C]ccaacatactccctggcagcctcc
- ASB in cell types
- A549 (lung carcinoma) 22RV1 (prostate carcinoma) SUM159PT (Triple negative breast cancer) HL-60 (acute myeloid leukemia)
- ASB for transcription factors
- JUN_HUMAN ANDR_HUMAN INT11_HUMAN BRD4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.22 | 0.33 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.82 | -1.26 | 2.00 | n/a | No Hit | |||
| INT11_HUMAN | 1.78 | -1.20 | 1.00 | n/a | n/a | |||
| BRD4_HUMAN | 0.91 | 0.42 | 1.62 | n/a | n/a | |||
| BCL3_HUMAN | 2.13 | 0.26 | 2.00 | n/a | n/a |
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