ADASTRA v6.1.0
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rs12118463
chr1:20333191
A
>
G
Sequence
aatgtggttattaagagcccctgc[A/G]gtagaaccacttgaagaacttgtt
ASB in cell types
ICN12 (primary pre-B acute lymphomablastic leukemia)
ASB for transcription factors
PBX1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PBX1_HUMAN
-1.96
2.42
1.00
0.02
1.50
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
,
ldl cholesterol change with statins
,
obesity with early age of onset (age >2)
,
total cholesterol
,
triglycerides
GTEx eQTL
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Testis
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)