rs12119232 chr1:171742012 A>C
- Sequence
ggtaagaagctgggagggggagac[A/C]gttggtgcggacccggcgtcggcc
- ASB in cell types
- HEK293 (embryonic kidney) 22RV1 (prostate carcinoma) adult erythroblasts neural cell
- ASB for transcription factors
- MEN1_HUMAN ANDR_HUMAN ZFX_HUMAN PRD10_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEN1_HUMAN | 2.39 | n/a | 3.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.56 | -1.43 | 2.00 | n/a | No Hit | |||
| ZFX_HUMAN | -0.88 | 1.21 | 1.38 | n/a | No Hit | |||
| PRD10_HUMAN | 2.04 | -0.07 | 2.50 | n/a | n/a | |||
| CDN1B_HUMAN | 1.68 | 0.06 | 1.83 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Uterus, Whole_Blood