rs12143914 chr1:118660677 C>T

Sequence
tggcctctttcaatctttcatctt[C/T]tttgaacagtaaatcccttcactc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.05 -1.26 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  barnes akathisia rating scale,  coronary artery disease (cad),  cystatin c in serum,  parkinsons disease (pd) (age of onset),  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Lung,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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