rs12146687 chr11:128463320 T>C
- Sequence
tcctgtaagacaaatggggtaaca[T/C]agatcttttctctattttccaaat
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- TCF21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 1.86 | -3.35 | 1.50 | 3.85 | Discordant |
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Motif analysis
Genetic associations
GRASP college completion, docetaxel response in lymphoblastoid cell lines, fasting insulin, systolic blood pressure (sbp), tetrology of fallot