rs12147685 chr14:34190024 A>G
- Sequence
agtaggaaggtagccatggacaat[A/G]tgcaaataaatgaacatagctgtg
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.17 | -0.04 | 1.67 | -0.72 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP brain lesion distribution in multiple sclerosis, mitral annular calcium, neuroblastoma (brain cancer)