rs12148632 chr15:91142362 A>G
- Sequence
tggcatttcaagatattttcctga[A/G]caaagagaacaacttcctgaaaaa
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) HeLa (cervical adenocarcinoma) GM18505 (female B-cells Lymphoblastoid Cell Lines) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.85 | 0.96 | 1.37 | n/a | No Hit | |||
| SPI1_HUMAN | 2.05 | 0.20 | 1.25 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Colon_Sigmoid, Colon_Transverse, Muscle_Skeletal, Nerve_Tibial, Pancreas