rs12149119 chr16:84603072 T>C

Sequence
cctggctctgcccctttcctccca[T/C]gtaacaatggcccagcgacttccc
ASB in cell types
SEM (childhood B acute lymphoblastic leukemia) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ERG_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ERG_HUMAN -0.93 3.29 1.001.6·10-10 1.42 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) obesity with early age of onset (age >2) rheumatoid arthritis
GTEx eQTL Whole_Blood

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