rs12149373 chr16:55833101 T>C
- Sequence
ggggcctgcgaggtctctgtgcag[T/C]tcagagggactgtgctgtccagcc
- ASB in cell types
- HepG2 (hepatoblastoma) liver
- ASB for transcription factors
- RXRA_HUMAN TEAD3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RXRA_HUMAN | 2.42 | -4.42 | 1.50 | -1.54 | Weak Concordant | |||
| TEAD3_HUMAN | 2.66 | -1.87 | 2.00 | n/a | No Hit |
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Motif analysis
