rs12150124 chr17:7132932 T>C

Sequence
gagcagtgacaccctgcaggtttc[T/C]aaactctgcttctctttgttttgt
ASB in cell types
CD14+ monocytes GM19240 (B cells Lymphoblastoid Cell Lines) iPS-derived chondrocytes
ASB for transcription factors
STAT1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.23 -0.99 1.2·10-31.00 3.00 n/a No Hit
CTCF_HUMAN 1.62 0.98 9.6·10-30.97 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Adipose_Subcutaneous Breast_Mammary_Tissue Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Whole_Blood

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