rs12151691 chr2:188342160 T>C
- Sequence
aacaaataccatacacttggtggc[T/C]gaaagcagcagacatttattctct
- ASB in cell types
- GM23338
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.32 | 2.03 | 1.44 | 0.36 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Nucleus_accumbens_basal_ganglia, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Heart_Left_Ventricle