rs12151742 chr2:85705880 C>T
- Sequence
tctgccaagcacactcaggttttc[C/T]atgttctgcttagaagttaccaac
- ASB in cell types
- liver ovary
- ASB for transcription factors
- ATF3_HUMAN EP300_HUMAN CEBPB_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | 2.71 | -2.78 | 1.00 | n/a | No Hit | |||
| EP300_HUMAN | 1.66 | 0.43 | 1.21 | n/a | n/a | |||
| CEBPB_HUMAN | 0.29 | 1.05 | 1.57 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, diastolic blood pressure (dbp), height, ldl cholesterol, tardive dyskinesia
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Thyroid, Whole_Blood