rs12155096 chr7:90298358 A>G
- Sequence
cttccaatagagacagtgccatct[A/G]gcagctgtgaagaatatagcccct
- ASB in cell types
- glioblastoma cells GM23338 PANC1 (pancreatic ductal adenocarcinoma) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.67 | -2.35 | 2.69 | 0.23 | Weak Discordant | |||
| RAD21_HUMAN | 3.11 | n/a | 2.00 | n/a | n/a |
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Motif analysis
