rs12157693 chr22:31343236 G>A

Sequence
tcaattctccccaccagaaactca[G/A]tgttttctaggaccagaggcggtg
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 3.03 -5.54 4.6·10-31.00 2.00 0.43 Weak Discordant
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GRASP infant head circumference,  obesity with early age of onset (age >2),  serum creatinine,  systolic blood pressure (sbp),  triglycerides
GTEx eQTL Esophagus_Muscularis,  Muscle_Skeletal,  Ovary,  Small_Intestine_Terminal_Ileum

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