rs12157958 chr22:18077845 T>G

Sequence
cccgaagctgtagcaccagtttgt[T/G]ttctcacggcacaggggcggcttc
ASB in cell types
MDM(monocyte derived macrophages) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
TF65_HUMAN SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 2.29 -5.11 4.9·10-31.00 2.50 n/a No Hit
SPI1_HUMAN 1.53 0.01 7.3·10-31.00 2.38 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins,  homa-b,  urinary albumin-to-creatinine ratio

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