rs12160838 chr22:42397557 G>A

Sequence
atgaaggagctttcttcattcttc[G/A]ccaacttgtgccgtcactacccct
ASB in cell types
CD14+ monocytes germinal center B-cells
ASB for transcription factors
STAT1_HUMAN CBP_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 1.96 0.47 5.4·10-51.00 1.75 n/a No Hit
CBP_HUMAN 2.48 n/a 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  paternal transmission distortion,  salmonella-induced pyroptosis,  transmission distortion
GTEx eQTL Adipose_Subcutaneous,  Lung,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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