rs12185470 chr18:731456 C>T
- Sequence
aatttgatggcattagatctacag[C/T]tggagggaactgtagggaagagga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN SMCA4_HUMAN REQU_HUMAN MTA2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.93 | 2.87 | 1.17 | n/a | n/a | |||
| SMCA4_HUMAN | -1.74 | 2.02 | 1.00 | n/a | n/a | |||
| REQU_HUMAN | -1.49 | 1.87 | 1.25 | n/a | n/a | |||
| MTA2_HUMAN | -0.40 | 2.28 | 1.00 | n/a | n/a | |||
| ZN316_HUMAN | -1.32 | 1.96 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cortex, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg