rs12188563 chr5:177005879 C>A
- Sequence
gggactcgcgccccgttaactgag[C/A]ggcagggcaccagcccgccggctg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) primary B-CLL cells adrenal gland
- ASB for transcription factors
- CTCF_HUMAN BRD4_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.86 | 0.33 | 1.33 | n/a | No Hit | |||
| BRD4_HUMAN | 2.34 | 0.22 | 1.25 | n/a | n/a | |||
| ZFX_HUMAN | 1.06 | 1.23 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3