rs12189647 chr6:73652537 A>G
- Sequence
gattatacatatacatatttttca[A/G]ttgtaacaatgtaataatctctgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.53 | 2.59 | 1.11 | n/a | No Hit | |||
| STAG1_HUMAN | -2.17 | 2.55 | 1.00 | n/a | n/a |
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