rs12189648 chr6:148761717 G>A

Sequence
cctgcagccttgccagcctggccc[G/A]gggattgtggtgtggtcacctctt
ASB for transcription factors
SMCA4_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.17 0.51 0.040.86 2.25 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hip bone mineral density (bmd),  irritible bowel syndrome,  schizophrenia,  spine bone mineral density (bmd)
GTEx eQTL Pancreas

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