rs12190023 chr6:2917233 T>C
- Sequence
aggtactggtcattatctacccca[T/C]agcaatgacacacacacatgcaca
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.93 | 0.41 | 2.95 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_EBV-transformed_lymphocytes, Esophagus_Muscularis, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood