rs12192271 chr6:153791257 A>G
- Sequence
gagttgatgtagcagttcaagtct[A/G]aagtctgccatctgctggcagaat
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.80 | -0.20 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.72 | 0.38 | 1.46 | n/a | No Hit |
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