rs12192563 chr6:16093231 A>T
- Sequence
ccctaaaacctcgaaggagaagga[A/T]gggaagtgagccctgatgcggaat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- IKZF1_HUMAN COT1_HUMAN IKZF2_HUMAN REQU_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.95 | -2.06 | 1.25 | n/a | n/a | |||
| COT1_HUMAN | 3.38 | -3.52 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.18 | -3.24 | 1.50 | n/a | n/a | |||
| REQU_HUMAN | 2.46 | -2.49 | 1.00 | n/a | n/a | |||
| MTA2_HUMAN | 2.57 | -4.57 | 1.50 | n/a | n/a |
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Motif analysis
