rs12193402 chr6:52421034 A>C

Sequence
tcccagctccatttcctgttttgt[A/C]tgtatatcgattccgctcctcttc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.44 2.05 1.001.9·10-3 1.88 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight ldl cholesterol urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24 Cells_Cultured_fibroblasts Esophagus_Mucosa

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