rs12195857 chr6:143642758 G>A

Sequence
tgggtgatgcttctacaaacctag[G/A]aatgtcaaagtttgccagcaaacc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.06 -0.78 1.3·10-31.00 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  homa-ir,  total cholesterol,  triglycerides
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Substantia_nigra,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Nerve_Tibial

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