rs12196215 chr6:157021561 G>A
- Sequence
ggctcgtgggggcggggacagggg[G/A]acgaaaacaaccgcgtcctcagcc
- ASB in cell types
- CD14+ monocytes Peyer's patch SUM159PT (Triple negative breast cancer) WA09 (embryonic stem cells)
- ASB for transcription factors
- STAT1_HUMAN TP53B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.78 | -0.33 | 2.00 | 3.71 | Discordant | |||
| TP53B_HUMAN | 2.27 | -2.27 | 1.00 | n/a | n/a |
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Motif analysis
