rs12199406 chr6:5898125 G>A
- Sequence
aatgactgccaggaggggtctatg[G/A]gcccagtggatccactatgagcag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.62 | 1.38 | 1.20 | -0.68 | Weak Discordant |
Items per page:
1 – 1 of 1
Motif analysis
