rs12199529 chr6:52652208 C>T
- Sequence
tgaactatgggagagaccattacc[C/T]atgtgccagactggccactaggtg
- ASB in cell types
- erythroid progenitors CD14+ monocytes HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.17 | 0.19 | 1.47 | n/a | No Hit | |||
| STAT1_HUMAN | 3.01 | n/a | 2.00 | n/a | No Hit |
Items per page:
1 – 2 of 2