rs12199983 chr6:166634042 G>A

Sequence
agtgacactgtgtgggcagagtgt[G/A]ggctcagggcgtggggtcaggcag
ASB in cell types
monocytes from periferal blood macrophages
ASB for transcription factors
SRBP2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN 2.24 -0.69 9.7·10-41.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  fasting insulin,  hdl cholesterol,  homa-b,  ldl cholesterol,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Thyroid

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