rs12200757 chr6:109330017 C>T
- Sequence
catacacacatgcatatacacagt[C/T]cttggagttttgaaacatgtttat
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.32 | 1.82 | 2.64 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, hdl cholesterol, mean corpuscular hemoglobin concentration (mchc), mean corpuscular volume (mcv), mitral annular calcium, obesity with early age of onset (age >2), red blood cell count (rbc), refractive error, total cholesterol
GTEx eQTL Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Muscle_Skeletal, Spleen, Testis, Thyroid, Whole_Blood