rs12201825 chr6:42136815 A>G
- Sequence
aggggatgctgaagattcgactgg[A/G]gtggaggggaggaggggcagggag
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) WA01 (H1, human embryonic stem cells)
- ASB for transcription factors
- CTCF_HUMAN TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.48 | 0.54 | 1.18 | n/a | No Hit | |||
| TIF1B_HUMAN | -0.69 | 2.20 | 1.33 | n/a | n/a |
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