rs12204307 chr6:10343468 G>A
- Sequence
ggaattccaaggctgaggggccac[G/A]tttaatgagagcctcctgctggtg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) PANC1 (pancreatic ductal adenocarcinoma) MCF7L-P(immortalized breast epithelial cell line) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.59 | 0.70 | 1.41 | n/a | No Hit | |||
| RAD21_HUMAN | 2.01 | -0.48 | 1.00 | n/a | n/a |
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