rs12204645 chr6:125020193 G>A

Sequence
gcttgggctcagatgtctgccaag[G/A]tcttgattattctattttagtgta
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -0.84 1.64 1.009.2·10-7 1.59 n/a No Hit
ANDR_HUMAN -0.02 2.27 1.004.6·10-3 1.58 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts

Download