rs12206438 chr6:133184978 A>G

Sequence
tggaagtatatttcagggtacatt[A/G]tactttattgtgggtcaatagggg
ASB in cell types
K562 (myelogenous leukemia) thoracic aorta

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 2.47 -0.66 9.3·10-61.00 2.05
thoracic aorta 2.62 -2.34 5.3·10-31.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  total cholesterol,  triglycerides change with statins,  years of education
GTEx eQTL Brain_Cortex,  Brain_Spinal_cord_cervical_c-1,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Nerve_Tibial

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