rs12206549 chr6:7998105 A>C

Sequence
ccaaatttcaatattaccaagaaa[A/C]taatgaccattccagaaaacatta
ASB for transcription factors
TCF21_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 1.87 -4.33 0.051.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  height,  infant head circumference,  ldl cholesterol,  rheumatoid arthritis,  serum creatinine,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Whole_Blood

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