rs12206920 chr6:56101229 C>G

Sequence
gatgtttgtgttaaccatgcattt[C/G]tttgggcatgagtgcttgtggttt
ASB in cell types
MOLM-13(acute monocytic leukemia(AML), Homo sapiens) breast tumor
ASB for transcription factors
P63_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
P63_HUMAN -2.06 2.11 1.009.0·10-3 1.50 3.67 Concordant
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Motif analysis

P63_HUMAN Concordant
P63_HUMAN pic

Genetic associations

GRASP adiponectin levels,  refractive error,  triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Breast_Mammary_Tissue,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Minor_Salivary_Gland,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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