rs12207689 chr6:39198720 T>C

Sequence
gggaggtaacaagcccactgttgc[T/C]tgcagggtcaggccatatatgggg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
SRF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRF_HUMAN 2.74 n/a 2.5·10-31.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  diastolic blood pressure (dbp),  hdl cholesterol,  refractive error,  urinary albumin-to-creatinine ratio,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic

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