rs12208141 chr6:111250935 G>A
- Sequence
cagccatagataatgtgtacataa[G/A]caggcatggctatgttccaataaa
- ASB in cell types
- LNCaP (prostate carcinoma) K562 (myelogenous leukemia) VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ZBT40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.58 | -0.08 | 1.82 | 3.67 | Discordant | |||
| ZBT40_HUMAN | 0.73 | -1.13 | 2.00 | n/a | No Hit |
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Motif analysis
