rs12209078 chr6:42049058 T>C
- Sequence
tttttctttttcttttttttgaga[T/C]ggagtctccctctgtcgcccaggc
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- SIN3A_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SIN3A_HUMAN | -1.55 | 1.82 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.48 | -1.70 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal