rs12209631 chr6:11241970 G>A
- Sequence
gcgggaacacagcacaccctgcac[G/A]gttcaagccaagcttttgaagagt
- ASB in cell types
- HepG2 (hepatoblastoma) epithelial cell of prostate prostate gland right lobe of liver
- ASB for transcription factors
- CTCF_HUMAN TEAD1_HUMAN RAD21_HUMAN SOX13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.41 | 1.41 | 1.20 | n/a | No Hit | |||
| TEAD1_HUMAN | n/a | 3.18 | 2.00 | n/a | No Hit | |||
| RAD21_HUMAN | -0.06 | 1.95 | 1.75 | n/a | n/a | |||
| SOX13_HUMAN | -4.99 | 2.91 | 2.00 | n/a | No Hit | |||
| BCL6_HUMAN | -1.94 | 2.72 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, microalbuminuria, obesity with early age of onset (age >2), urinary albumin-to-creatinine ratio