rs12210478 chr6:149129889 G>A

Sequence
ctgtaaaaaaaaaaatgatgtgtc[G/A]aactactcatcattgagcaacagg
ASB in cell types
K562 (myelogenous leukemia) MSC (mesenchymal stem cells) BJ (fibroblasts)
ASB for transcription factors
COT1_HUMAN NR2F6_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN 1.30 -1.30 0.011.00 1.00 n/a No Hit
NR2F6_HUMAN 2.36 -2.38 0.031.00 1.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Liver

Download