rs12211057 chr6:155645542 A>C
- Sequence
acgggaagattagtaatcaagcca[A/C]acactagaaggtaaaacaacatgt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF3_HUMAN RING2_HUMAN MGAP_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | -3.60 | 3.23 | 1.00 | n/a | No Hit | |||
| RING2_HUMAN | -3.01 | 3.06 | 1.00 | n/a | n/a | |||
| MGAP_HUMAN | -2.76 | 2.85 | 1.00 | n/a | No Hit | |||
| HDAC1_HUMAN | -0.72 | 2.48 | 1.00 | n/a | n/a | |||
| TAF9B_HUMAN | -2.66 | 2.57 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), height, ldl cholesterol change with statins, neuroblastoma (brain cancer), paternal transmission distortion, sporadic creutzfeldt-jakob disease, transmission distortion