rs12214600 chr6:39300960 C>T
- Sequence
ctgctgggaaagttacttcctcat[C/T]tgtaaaatggagacagtaagagtc
- ASB in cell types
- THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.46 | 1.67 | 1.58 | 1.52 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP comorbid depressive syndrome and alcohol dependence, diastolic blood pressure (dbp), fasting insulin, hdl cholesterol, hdl cholesterol change with statins, homa-b, homa-ir, premature ovarian failure, years of education