rs12216301 chr6:119120148 C>T
- Sequence
gttgcatcactgcaaaaagaaacc[C/T]tgcacccatttgctgttactcata
- ASB in cell types
- CD14+ monocytes THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- STAT1_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.06 | n/a | 2.00 | 0.39 | Weak Discordant | |||
| CEBPA_HUMAN | 0.63 | 1.53 | 1.94 | n/a | No Hit |
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Motif analysis
