rs12216661 chr7:130011040 G>A
- Sequence
gaacatgggggacatctagtggcc[G/A]tagtgggtactgctagcattcttg
- ASB in cell types
- K562 (myelogenous leukemia) WA09 (embryonic stem cells) GBM39 (Human brain tumor) erythroid progenitors
- ASB for transcription factors
- RAD21_HUMAN PRD10_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.72 | 0.52 | 1.20 | n/a | n/a | |||
| PRD10_HUMAN | 2.69 | n/a | 1.50 | n/a | n/a | |||
| FOXK2_HUMAN | 1.30 | -0.21 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg